I say it every time with autos, if they're saved - will it grow? Yes. Will it produce what you wanted? Probably not. If it has lost time due to issues, it will remain small and not produce much bud. It matters how much time was lost, what happened and so on, but it is ultimately your choice as a grower whether to let it grow or get rid of it and start again.
As for the clones, if you figured out what was wrong, they're going to be fine, as long as they're photo strains.