Cannabis is a "gross feeder" meaning she is a hungry plant.
3 months might be fine for petunias but you will need to feed your cannabis plants, especially in those small pots and soon.
The spots are an indication of a calcium and magnesium deficiency and the yellowing a nitrogen deficiency.
Buy some cannabis specific nutrients, follow the instructions and your plants should continue on their merry way.
In future, pots of 15-18 litres would be far more suitable for your autos.
Cheers, Organoman.