Burning due to a fertilizer salt build up in the substrate is the cause of the brown spots.
At this lat stage I would not worry about it, there is no time to "fix" anything before harvest time.
It is a long term build up that can not be solved over night.
"Flushing", which some people might suggest, will actually cause more problems than it will solve, by releasing even more salts and making the problem worse.
Do nothing, but you could ease back on the feeding a bit.