I think its a combination of low RH in the room, to much nutrients and a hot medium for the young plants. And i would look into if the ph is on point in the water and soil.
Try to raise the temperature to at least 20 degrees Celsius in the low range.
When i veg my plants i have them in a dome the first 2 weeks so they get a even rh and temperature.
So my solution for you is, flush medium with ph 5.8 water, rise the temperature a little and rise the rh in the room to 60-80%.
And Then just let them have water the next 2 weeks and no nutes.
The spots is not going to go away but you wont having any new ones.
Good luck.